CDS

Accession Number TCMCG042C39540
gbkey CDS
Protein Id XP_016471676.1
Location complement(join(143..179,794..1233,1944..2105,3606..3830,3983..4081,4184..4595,5172..5278))
Gene LOC107793762
GeneID 107793762
Organism Nicotiana tabacum

Protein

Length 493aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016616190.1
Definition PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like isoform X2 [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category A
Description DEAD-box ATP-dependent RNA helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K16911        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko01110        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0000373        [VIEW IN EMBL-EBI]
GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009414        [VIEW IN EMBL-EBI]
GO:0009415        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010501        [VIEW IN EMBL-EBI]
GO:0016032        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0018995        [VIEW IN EMBL-EBI]
GO:0019034        [VIEW IN EMBL-EBI]
GO:0019058        [VIEW IN EMBL-EBI]
GO:0019079        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033643        [VIEW IN EMBL-EBI]
GO:0033646        [VIEW IN EMBL-EBI]
GO:0033647        [VIEW IN EMBL-EBI]
GO:0033648        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0039694        [VIEW IN EMBL-EBI]
GO:0042025        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043656        [VIEW IN EMBL-EBI]
GO:0043657        [VIEW IN EMBL-EBI]
GO:0044094        [VIEW IN EMBL-EBI]
GO:0044215        [VIEW IN EMBL-EBI]
GO:0044216        [VIEW IN EMBL-EBI]
GO:0044217        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044403        [VIEW IN EMBL-EBI]
GO:0044419        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCAGGGGTCGGACATGATTGGCCGAGCTAGAACTGGAACTGGAAAGACACTAGCTTTTGGCATTCCTATCATGGATAAGATCATCAAATTCAACAATAAAAAAGGACGGGGAAGAAACCCTTTGGCATTGATCTTGGCTCCCACTAGAGAACTTGCACGGCAGGTGGAGAAAGAATTTTATGAGTCTGCTCCTGTTTTGGATACGCTATGTGTTTATGGTGGTGTCCCCATTCAACGCCAAATGAGTACTCTTCAAAGGGGTGCAGACATTGTTGTTGGGACACCTGGTCGGATCATTGATCTGCTGAAGAGGGGGTCCTTGAATTTATCAGAAATCCAGTTCGTTGTTCTAGATGAAGCTGATCAGATGCTTAACGTGGGCTTCGCGGAGGATGTTGAAACCATTCTTGAAAATGTTCGGCAGAAACATCAGACGATGATGTTTTCAGCCACAATGCCAAGTTGGATAATGAAAATTACCAACAAGTTCTTGAAGAAGCCAATTCACATTGATCTTGTAGGGGATTCTGACCAGAAATTAGCCGATGGAATTTCCTTGTATTCAATTGCTTGTGAGATGCGTCAGAAACCGGCAGTTCTTGGACCCTTAATATCAGAGCATGCAAAAGGAGGCAAGTGTATTGTCTTTACTCAAACAAAGCGTGATGCTGATAGGTTGGCGAGTTCAATGCAAAAAACTTTGAGATGTGAAGCTTTGCATGGGGATATCACACAAAGCCAGAGGGAGAGAACTCTGTCCGGTTTTCGACAAGGTCAATTCAATGTATTGGTGGCCACTGATGTTGCTGCTCGAGGGCTTGATGTACCTAATGTTGATCTGGTGATACATTACGAACTTCCAAACTCTTCAGAGATCTTTGTTCATCGATCTGGTCGAACTGGACGTGCTGGGAAGAAAGGAAGTGCCATTCTCATGCATTCCTCAAAGCAGCATAGGGATGTGAAAGGTATTGAGCATGATGCCGGATGCAGATTTACTGAGCTCCCAAGTATTAAAGTAGAGGCTGGAGCAGCAGACATGTATAGTGACATGGGCAAAGGCAGCGACCGCTTTGGTTCCTATGGAGGCACCATGCGTAGTCGATCTGGTGATTTTGGTGGAGGTCGTTCTGGTGGCTATGGAAATAAAGGCAGCAGGTTTGGTGGAGAAGGCGCTTCATCTTCTCGAACAGGTGGATACAGTGGAACTGGTTCAGGAAGATCAGGGGGTGGCTATGGTGGAACTAGCTCGGGCCGCTCAGGAAAGTTTGGTGGTTCTGGAGGCTCAAAACGTTTGGGTGGTTTCCGTAATTTTGGTTCGGGCCGTTCTAGTAGATTTGGAGATTCACAGTCTGACCGCAATAACCGTTCAAGCCGTTTTGATGACTTCGGAGATGGCAAGGATAGTGGTGATCAGAGTTCAGGGAGGAACTCCATTTCAAGGAGGCGTGCCCCCTGGGACTTCTCCATTAATAGATGA
Protein:  
MQGSDMIGRARTGTGKTLAFGIPIMDKIIKFNNKKGRGRNPLALILAPTRELARQVEKEFYESAPVLDTLCVYGGVPIQRQMSTLQRGADIVVGTPGRIIDLLKRGSLNLSEIQFVVLDEADQMLNVGFAEDVETILENVRQKHQTMMFSATMPSWIMKITNKFLKKPIHIDLVGDSDQKLADGISLYSIACEMRQKPAVLGPLISEHAKGGKCIVFTQTKRDADRLASSMQKTLRCEALHGDITQSQRERTLSGFRQGQFNVLVATDVAARGLDVPNVDLVIHYELPNSSEIFVHRSGRTGRAGKKGSAILMHSSKQHRDVKGIEHDAGCRFTELPSIKVEAGAADMYSDMGKGSDRFGSYGGTMRSRSGDFGGGRSGGYGNKGSRFGGEGASSSRTGGYSGTGSGRSGGGYGGTSSGRSGKFGGSGGSKRLGGFRNFGSGRSSRFGDSQSDRNNRSSRFDDFGDGKDSGDQSSGRNSISRRRAPWDFSINR